Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548n in SMCL Lung Bhattacharjee Cluster 30 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 30. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548n 22838 RNF44 ring finger protein 44 [Source:HGNC Symbol;Acc:19180] P T 56987 BBX bobby sox homolog (Drosophila) [Source:HGNC Symbol;Acc:14422] zzz999 23272 C3orf63 chromosome 3 open reading frame 63 [Source:HGNC Symbol;Acc:30314] P T 80208 SPG11 spastic paraplegia 11 (autosomal recessive) [Source:HGNC Symbol;Acc:11226] zzz999 5527 PPP2R5C protein phosphatase 2, regulatory subunit B', gamma [Source:HGNC Symbol;Acc:9311] P 23768 FLRT2 fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:3761] P T 5336 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) [Source:HGNC Symbol;Acc:9066] zzz999 648 BMI1 BMI1 polycomb ring finger oncogene [Source:HGNC Symbol;Acc:1066] P T 663 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 [Source:HGNC Symbol;Acc:1083] zzz999 64844 MARCH7 membrane-associated ring finger (C3HC4) 7 [Source:HGNC Symbol;Acc:17393] P T 5834 PYGB phosphorylase, glycogen; brain [Source:HGNC Symbol;Acc:9723] zzz999 9475 ROCK2 Rho-associated, coiled-coil containing protein kinase 2 [Source:HGNC Symbol;Acc:10252] zzz999 23376 KIAA0776 KIAA0776 [Source:HGNC Symbol;Acc:23039] T 7050 TGIF1 TGFB-induced factor homeobox 1 [Source:HGNC Symbol;Acc:11776] zzz999 25957 SFRS18 splicing factor, arginine/serine-rich 18 [Source:HGNC Symbol;Acc:21222] P T 23275 POFUT2 protein O-fucosyltransferase 2 [Source:HGNC Symbol;Acc:14683] zzz999 23112 TNRC6B trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190] P T 23077 MYCBP2 MYC binding protein 2 [Source:HGNC Symbol;Acc:23386] zzz999 6432 SRSF7 serine/arginine-rich splicing factor 7 [Source:HGNC Symbol;Acc:10789] T 5286 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide [Source:HGNC Symbol;Acc:8971] zzz999 1432 MAPK14 mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:6876] zzz999 3190 HNRNPK heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:5044] T 29969 MDFIC MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:28870] T 309 ANXA6 annexin A6 [Source:HGNC Symbol;Acc:544] zzz999 10291 SF3A1 splicing factor 3a, subunit 1, 120kDa [Source:HGNC Symbol;Acc:10765] T 55308 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A [Source:HGNC Symbol;Acc:25628] T 23122 CLASP2 cytoplasmic linker associated protein 2 [Source:HGNC Symbol;Acc:17078] P T 1859 DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A [Source:HGNC Symbol;Acc:3091] P T 89870 TRIM15 tripartite motif containing 15 [Source:HGNC Symbol;Acc:16284] T 1540 CYLD cylindromatosis (turban tumor syndrome) [Source:HGNC Symbol;Acc:2584] T 3189 HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:HGNC Symbol;Acc:5043] P T 1983 EIF5 eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:3299] T 7327 UBE2G2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:HGNC Symbol;Acc:12483] zzz999 5257 PHKB phosphorylase kinase, beta [Source:HGNC Symbol;Acc:8927] zzz999 23405 DICER1 dicer 1, ribonuclease type III [Source:HGNC Symbol;Acc:17098] P T 1105 CHD1 chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:1915] P T 10250 SRRM1 serine/arginine repetitive matrix 1 [Source:HGNC Symbol;Acc:16638] zzz999 8854 ALDH1A2 aldehyde dehydrogenase 1 family, member A2 [Source:HGNC Symbol;Acc:15472] zzz999 6304 SATB1 SATB homeobox 1 [Source:HGNC Symbol;Acc:10541] P T 794 CALB2 calbindin 2 [Source:HGNC Symbol;Acc:1435] zzz999 23241 PACS2 phosphofurin acidic cluster sorting protein 2 [Source:HGNC Symbol;Acc:23794] zzz999 3987 LIMS1 LIM and senescent cell antigen-like domains 1 [Source:HGNC Symbol;Acc:6616] zzz999 8202 NCOA3 nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:7670] P T 6235 RPS29 ribosomal protein S29 [Source:HGNC Symbol;Acc:10419] zzz999

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